Modifier and Type | Class and Description |
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class |
JannovarAnnotationCommand
Base class for commands needing annotation data.
|
Modifier and Type | Class and Description |
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class |
AnnotateCSVCommand
Allows the annotation of a CVF file.
|
Modifier and Type | Class and Description |
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class |
AnnotatePositionCommand
Allows the annotation of a single position.
|
Modifier and Type | Class and Description |
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class |
AnnotateVCFCommand
Run annotation steps (read in VCF, write out VCF or Jannovar file format).
|
Modifier and Type | Class and Description |
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class |
DatabaseListCommand |
Modifier and Type | Class and Description |
---|---|
class |
DownloadCommand
Implementation of download step in Jannovar.
|
Modifier and Type | Class and Description |
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class |
ProjectTranscriptToChromosome
Project transcript to chromosomal changes
|
Modifier and Type | Class and Description |
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class |
GatherStatisticsCommand
Jannovar command for gathering statistics about variant effect distribution etc.
|
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